Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc6a20bO88575 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a20bO88575 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a20bO88575 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a20bO88575 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a20bO88575 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a20bO88575 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a20bO88575 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a20bO88575 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.83■□□□□ 0.93
Slc6a20bO88575 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a20bO88575 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a20bO88575 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.83■□□□□ 0.92
Slc6a20bO88575 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Slc6a20bO88575 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc6a20bO88575 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Slc6a20bO88575 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc6a20bO88575 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a20bO88575 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.81■□□□□ 0.92
Slc6a20bO88575 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a20bO88575 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc6a20bO88575 Gm13158-201ENSMUST00000122007 736 ntBASIC20.79■□□□□ 0.92
Slc6a20bO88575 Gm10231-201ENSMUST00000181584 441 ntBASIC20.79■□□□□ 0.92
Slc6a20bO88575 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a20bO88575 Gm10175-202ENSMUST00000208752 441 ntBASIC20.79■□□□□ 0.92
Slc6a20bO88575 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a20bO88575 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.79■□□□□ 0.92
Slc6a20bO88575 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a20bO88575 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a20bO88575 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc6a20bO88575 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Slc6a20bO88575 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.77■□□□□ 0.92
Slc6a20bO88575 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.77■□□□□ 0.92
Slc6a20bO88575 Mir5122-201ENSMUST00000175004 89 ntBASIC20.77■□□□□ 0.92
Slc6a20bO88575 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc6a20bO88575 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slc6a20bO88575 Gm6433-201ENSMUST00000118634 875 ntBASIC20.76■□□□□ 0.91
Slc6a20bO88575 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.76■□□□□ 0.91
Slc6a20bO88575 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.76■□□□□ 0.91
Slc6a20bO88575 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Slc6a20bO88575 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc6a20bO88575 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms