Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna4O70174 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna4O70174 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna4O70174 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chrna4O70174 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna4O70174 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna4O70174 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chrna4O70174 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna4O70174 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.16■□□□□ 0.66
Chrna4O70174 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Chrna4O70174 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna4O70174 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna4O70174 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna4O70174 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna4O70174 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.15■□□□□ 0.66
Chrna4O70174 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.15■□□□□ 0.66
Chrna4O70174 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.15■□□□□ 0.66
Chrna4O70174 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.15■□□□□ 0.66
Chrna4O70174 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Chrna4O70174 Gm9988-201ENSMUST00000069786 435 ntBASIC19.15■□□□□ 0.66
Chrna4O70174 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna4O70174 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.15■□□□□ 0.66
Chrna4O70174 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna4O70174 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Chrna4O70174 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chrna4O70174 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna4O70174 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.14■□□□□ 0.65
Chrna4O70174 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chrna4O70174 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Chrna4O70174 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chrna4O70174 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna4O70174 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna4O70174 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Chrna4O70174 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna4O70174 Reep4-203ENSMUST00000226563 1444 ntBASIC19.12■□□□□ 0.65
Chrna4O70174 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna4O70174 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna4O70174 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.12■□□□□ 0.65
Chrna4O70174 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna4O70174 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Chrna4O70174 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.11■□□□□ 0.65
Chrna4O70174 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.11■□□□□ 0.65
Chrna4O70174 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.11■□□□□ 0.65
Chrna4O70174 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.11■□□□□ 0.65
Chrna4O70174 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chrna4O70174 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Chrna4O70174 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna4O70174 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chrna4O70174 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Chrna4O70174 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Chrna4O70174 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Chrna4O70174 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.1■□□□□ 0.65
Chrna4O70174 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Chrna4O70174 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Chrna4O70174 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna4O70174 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Chrna4O70174 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna4O70174 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Chrna4O70174 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.09■□□□□ 0.65
Chrna4O70174 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.09■□□□□ 0.65
Chrna4O70174 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chrna4O70174 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms