Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
StrnO55106 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
StrnO55106 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.92■□□□□ 0.94
StrnO55106 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.92■□□□□ 0.94
StrnO55106 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.92■□□□□ 0.94
StrnO55106 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.92■□□□□ 0.94
StrnO55106 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
StrnO55106 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
StrnO55106 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
StrnO55106 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.91■□□□□ 0.94
StrnO55106 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
StrnO55106 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
StrnO55106 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
StrnO55106 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
StrnO55106 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrnO55106 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrnO55106 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrnO55106 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrnO55106 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
StrnO55106 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
StrnO55106 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
StrnO55106 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
StrnO55106 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
StrnO55106 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.89■□□□□ 0.93
StrnO55106 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
StrnO55106 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
StrnO55106 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
StrnO55106 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.89■□□□□ 0.93
StrnO55106 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
StrnO55106 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
StrnO55106 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
StrnO55106 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.87■□□□□ 0.93
StrnO55106 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
StrnO55106 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
StrnO55106 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
StrnO55106 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
StrnO55106 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.86■□□□□ 0.93
StrnO55106 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
StrnO55106 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
StrnO55106 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
StrnO55106 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
StrnO55106 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
StrnO55106 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
StrnO55106 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
StrnO55106 Gm12896-201ENSMUST00000118430 226 ntBASIC20.85■□□□□ 0.93
StrnO55106 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
StrnO55106 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrnO55106 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrnO55106 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
StrnO55106 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
StrnO55106 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
StrnO55106 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
StrnO55106 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.84■□□□□ 0.93
StrnO55106 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
StrnO55106 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
StrnO55106 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
StrnO55106 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
StrnO55106 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrnO55106 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrnO55106 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
StrnO55106 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrnO55106 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.83■□□□□ 0.93
StrnO55106 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
StrnO55106 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
StrnO55106 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.83■□□□□ 0.93
StrnO55106 Gm2559-201ENSMUST00000201323 363 ntBASIC20.83■□□□□ 0.93
StrnO55106 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms