Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Npc1O35604 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.47■□□□□ 0.55
Npc1O35604 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.47■□□□□ 0.55
Npc1O35604 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Npc1O35604 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Npc1O35604 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Npc1O35604 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Npc1O35604 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Npc1O35604 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Npc1O35604 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.45■□□□□ 0.54
Npc1O35604 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.45■□□□□ 0.54
Npc1O35604 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.45■□□□□ 0.54
Npc1O35604 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.45■□□□□ 0.54
Npc1O35604 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Npc1O35604 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Npc1O35604 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Npc1O35604 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.44■□□□□ 0.54
Npc1O35604 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.44■□□□□ 0.54
Npc1O35604 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Npc1O35604 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Gm13146-201ENSMUST00000118508 780 ntBASIC18.43■□□□□ 0.54
Npc1O35604 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Npc1O35604 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.43■□□□□ 0.54
Npc1O35604 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Npc1O35604 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Npc1O35604 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.42■□□□□ 0.54
Npc1O35604 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Npc1O35604 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Npc1O35604 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.41■□□□□ 0.54
Npc1O35604 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1O35604 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.41■□□□□ 0.54
Npc1O35604 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1O35604 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1O35604 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1O35604 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Npc1O35604 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Npc1O35604 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.4■□□□□ 0.54
Npc1O35604 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Npc1O35604 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.4■□□□□ 0.54
Npc1O35604 Gm37179-201ENSMUST00000194862 823 ntBASIC18.4■□□□□ 0.54
Npc1O35604 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.4■□□□□ 0.54
Npc1O35604 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Npc1O35604 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Npc1O35604 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Npc1O35604 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Npc1O35604 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Gm7514-201ENSMUST00000209475 934 ntBASIC18.39■□□□□ 0.53
Npc1O35604 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Npc1O35604 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms