Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gm10033-202ENSMUST00000211874 928 ntBASIC17.76■□□□□ 0.43
Cx3cl1O35188 Gm18671-201ENSMUST00000214826 683 ntBASIC17.76■□□□□ 0.43
Cx3cl1O35188 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cx3cl1O35188 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Gm7860-201ENSMUST00000121190 879 ntBASIC17.75■□□□□ 0.43
Cx3cl1O35188 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.75■□□□□ 0.43
Cx3cl1O35188 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.75■□□□□ 0.43
Cx3cl1O35188 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cx3cl1O35188 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.74■□□□□ 0.43
Cx3cl1O35188 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Gm38205-201ENSMUST00000192243 258 ntBASIC17.74■□□□□ 0.43
Cx3cl1O35188 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cx3cl1O35188 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Gm26571-201ENSMUST00000181399 666 ntBASIC17.73■□□□□ 0.43
Cx3cl1O35188 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.73■□□□□ 0.43
Cx3cl1O35188 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.73■□□□□ 0.43
Cx3cl1O35188 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.72■□□□□ 0.43
Cx3cl1O35188 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cx3cl1O35188 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cl1O35188 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cl1O35188 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cl1O35188 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cl1O35188 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cx3cl1O35188 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Gm10849-201ENSMUST00000100397 618 ntBASIC17.7■□□□□ 0.42
Cx3cl1O35188 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 AV356131-201ENSMUST00000206201 750 ntBASIC17.7■□□□□ 0.42
Cx3cl1O35188 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cx3cl1O35188 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Gm13146-201ENSMUST00000118508 780 ntBASIC17.69■□□□□ 0.42
Cx3cl1O35188 Gm42569-201ENSMUST00000200539 472 ntBASIC17.69■□□□□ 0.42
Cx3cl1O35188 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cx3cl1O35188 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms