Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ClockO08785 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ClockO08785 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.01■□□□□ 0.47
ClockO08785 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ClockO08785 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Gm9885-202ENSMUST00000186234 2209 ntBASIC18■□□□□ 0.47
ClockO08785 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18■□□□□ 0.47
ClockO08785 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18■□□□□ 0.47
ClockO08785 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ClockO08785 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.99■□□□□ 0.47
ClockO08785 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.99■□□□□ 0.47
ClockO08785 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.99■□□□□ 0.47
ClockO08785 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ClockO08785 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ClockO08785 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.98■□□□□ 0.47
ClockO08785 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.98■□□□□ 0.47
ClockO08785 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ClockO08785 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ClockO08785 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ClockO08785 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.97■□□□□ 0.47
ClockO08785 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ClockO08785 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.97■□□□□ 0.47
ClockO08785 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.97■□□□□ 0.47
ClockO08785 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.97■□□□□ 0.47
ClockO08785 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.97■□□□□ 0.47
ClockO08785 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ClockO08785 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ClockO08785 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.96■□□□□ 0.47
ClockO08785 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.96■□□□□ 0.47
ClockO08785 Gm40881-201ENSMUST00000223397 166 ntBASIC17.96■□□□□ 0.47
ClockO08785 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ClockO08785 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ClockO08785 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ClockO08785 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.95■□□□□ 0.46
ClockO08785 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.95■□□□□ 0.46
ClockO08785 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ClockO08785 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms