Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Tnfrsf11bO08712 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Tnfrsf11bO08712 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tnfrsf11bO08712 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tnfrsf11bO08712 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tnfrsf11bO08712 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tnfrsf11bO08712 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tnfrsf11bO08712 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Gm27454-201ENSMUST00000185090 204 ntBASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tnfrsf11bO08712 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Gm7860-201ENSMUST00000121190 879 ntBASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Gm27801-201ENSMUST00000184174 223 ntBASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tnfrsf11bO08712 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms