Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp35M0QWN7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp35M0QWN7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp35M0QWN7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp35M0QWN7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.26■□□□□ 0.83
Usp35M0QWN7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.26■□□□□ 0.83
Usp35M0QWN7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp35M0QWN7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Gm7514-201ENSMUST00000209475 934 ntBASIC20.25■□□□□ 0.83
Usp35M0QWN7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp35M0QWN7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp35M0QWN7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp35M0QWN7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp35M0QWN7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp35M0QWN7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp35M0QWN7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp35M0QWN7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp35M0QWN7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp35M0QWN7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp35M0QWN7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp35M0QWN7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Usp35M0QWN7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.18■□□□□ 0.82
Usp35M0QWN7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms