Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13d-3J3QMG8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13d-3J3QMG8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Golph3-205ENSMUST00000228671 2842 ntBASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13d-3J3QMG8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Gm38205-201ENSMUST00000192243 258 ntBASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13d-3J3QMG8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13d-3J3QMG8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Gm9988-201ENSMUST00000069786 435 ntBASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav13d-3J3QMG8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 BC021767-201ENSMUST00000126387 1716 ntBASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav13d-3J3QMG8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms