Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
9930021J03RikH3BKP8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
9930021J03RikH3BKP8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
9930021J03RikH3BKP8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
9930021J03RikH3BKP8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
9930021J03RikH3BKP8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
9930021J03RikH3BKP8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
9930021J03RikH3BKP8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
9930021J03RikH3BKP8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Gm6420-201ENSMUST00000193885 723 ntBASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
9930021J03RikH3BKP8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms