Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim55G3X8Y1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Trim55G3X8Y1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Gm27502-201ENSMUST00000183495 199 ntBASIC19.45■□□□□ 0.7
Trim55G3X8Y1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim55G3X8Y1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim55G3X8Y1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim55G3X8Y1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim55G3X8Y1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim55G3X8Y1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim55G3X8Y1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Trim55G3X8Y1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim55G3X8Y1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim55G3X8Y1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim55G3X8Y1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms