Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdh1F7BJK1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdh1F7BJK1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdh1F7BJK1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdh1F7BJK1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdh1F7BJK1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.02■□□□□ 0.31
Pcdh1F7BJK1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdh1F7BJK1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pcdh1F7BJK1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pcdh1F7BJK1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pcdh1F7BJK1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms