Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm43060-201ENSMUST00000200621 289 ntBASIC19.46■□□□□ 0.71
Atf6F6VAN0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Atf6F6VAN0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Atf6F6VAN0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.45■□□□□ 0.7
Atf6F6VAN0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.45■□□□□ 0.7
Atf6F6VAN0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Atf6F6VAN0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.44■□□□□ 0.7
Atf6F6VAN0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.44■□□□□ 0.7
Atf6F6VAN0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.44■□□□□ 0.7
Atf6F6VAN0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atf6F6VAN0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Gm7860-201ENSMUST00000121190 879 ntBASIC19.43■□□□□ 0.7
Atf6F6VAN0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.43■□□□□ 0.7
Atf6F6VAN0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Atf6F6VAN0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Atf6F6VAN0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.41■□□□□ 0.7
Atf6F6VAN0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Atf6F6VAN0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Atf6F6VAN0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atf6F6VAN0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atf6F6VAN0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Atf6F6VAN0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atf6F6VAN0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms