Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cntnap3E9PY62 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cntnap3E9PY62 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.98■□□□□ 0.95
Cntnap3E9PY62 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Cntnap3E9PY62 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cntnap3E9PY62 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cntnap3E9PY62 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap3E9PY62 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.94■□□□□ 0.94
Cntnap3E9PY62 Gm13559-201ENSMUST00000120476 863 ntBASIC20.94■□□□□ 0.94
Cntnap3E9PY62 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.94■□□□□ 0.94
Cntnap3E9PY62 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cntnap3E9PY62 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cntnap3E9PY62 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Gm7461-201ENSMUST00000058918 827 ntBASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cntnap3E9PY62 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Gm23634-201ENSMUST00000175071 91 ntBASIC20.91■□□□□ 0.94
Cntnap3E9PY62 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Ank2-226ENSMUST00000189368 339 ntBASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cntnap3E9PY62 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Gm11539-201ENSMUST00000119837 557 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Gm13436-201ENSMUST00000120418 567 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cntnap3E9PY62 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.9■□□□□ 0.94
Cntnap3E9PY62 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cntnap3E9PY62 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.89■□□□□ 0.94
Cntnap3E9PY62 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cntnap3E9PY62 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Gm7889-201ENSMUST00000185591 958 ntBASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Gm33142-201ENSMUST00000193913 867 ntBASIC20.89■□□□□ 0.93
Cntnap3E9PY62 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cntnap3E9PY62 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms