Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Gm27454-201ENSMUST00000185090 204 ntBASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm28043E0CXC2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gm28043E0CXC2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.92■□□□□ 0.62
Gm28043E0CXC2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.91■□□□□ 0.62
Gm28043E0CXC2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Spcs1-204ENSMUST00000226782 949 ntBASIC18.9■□□□□ 0.62
Gm28043E0CXC2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Gm28043E0CXC2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm28043E0CXC2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Gm28043E0CXC2 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Gm28043E0CXC2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gm28043E0CXC2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms