Protein–RNA interactions for Protein: D3Z6J4

Vpreb3, Pre-B lymphocyte gene 3, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vpreb3D3Z6J4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Gm43566-201ENSMUST00000196851 808 ntBASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Gm10232-201ENSMUST00000089221 720 ntBASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vpreb3D3Z6J4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vpreb3D3Z6J4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vpreb3D3Z6J4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Vpreb3D3Z6J4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vpreb3D3Z6J4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.02□□□□□ -0.48
Vpreb3D3Z6J4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vpreb3D3Z6J4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Vpreb3D3Z6J4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vpreb3D3Z6J4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Gm43231-201ENSMUST00000202960 2258 ntBASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vpreb3D3Z6J4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vpreb3D3Z6J4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vpreb3D3Z6J4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vpreb3D3Z6J4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms