Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm3543D3Z235 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3543D3Z235 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3543D3Z235 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm3543D3Z235 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3543D3Z235 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3543D3Z235 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3543D3Z235 Gm27405-201ENSMUST00000184201 112 ntBASIC17.08■□□□□ 0.32
Gm3543D3Z235 Gm7291-201ENSMUST00000199147 382 ntBASIC17.08■□□□□ 0.32
Gm3543D3Z235 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm3543D3Z235 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.08■□□□□ 0.32
Gm3543D3Z235 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.08■□□□□ 0.32
Gm3543D3Z235 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm3543D3Z235 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3543D3Z235 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm3543D3Z235 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Gm26571-201ENSMUST00000181399 666 ntBASIC17.07■□□□□ 0.32
Gm3543D3Z235 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm3543D3Z235 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm3543D3Z235 AV356131-201ENSMUST00000206201 750 ntBASIC17.06■□□□□ 0.32
Gm3543D3Z235 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gm3543D3Z235 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.06■□□□□ 0.32
Gm3543D3Z235 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm3543D3Z235 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Gm10849-201ENSMUST00000100397 618 ntBASIC17.05■□□□□ 0.32
Gm3543D3Z235 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Gm10033-202ENSMUST00000211874 928 ntBASIC17.05■□□□□ 0.32
Gm3543D3Z235 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.05■□□□□ 0.32
Gm3543D3Z235 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm3543D3Z235 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm3543D3Z235 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Gm13234-201ENSMUST00000120010 747 ntBASIC17.03■□□□□ 0.32
Gm3543D3Z235 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm3543D3Z235 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Gm3543D3Z235 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm3543D3Z235 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm3543D3Z235 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gm3543D3Z235 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Gm3543D3Z235 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Gm3543D3Z235 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.02■□□□□ 0.31
Gm3543D3Z235 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm3543D3Z235 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm3543D3Z235 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3543D3Z235 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm3543D3Z235 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms