Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Gm9988-201ENSMUST00000069786 435 ntBASIC20.05■□□□□ 0.8
Rfx8D3YU81 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rfx8D3YU81 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.04■□□□□ 0.8
Rfx8D3YU81 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Rfx8D3YU81 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.04■□□□□ 0.8
Rfx8D3YU81 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.04■□□□□ 0.8
Rfx8D3YU81 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.04■□□□□ 0.8
Rfx8D3YU81 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.04■□□□□ 0.8
Rfx8D3YU81 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.04■□□□□ 0.8
Rfx8D3YU81 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rfx8D3YU81 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Gm18284-201ENSMUST00000172604 624 ntBASIC20.03■□□□□ 0.8
Rfx8D3YU81 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Rfx8D3YU81 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Gm5874-201ENSMUST00000096101 508 ntBASIC20.02■□□□□ 0.8
Rfx8D3YU81 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rfx8D3YU81 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rfx8D3YU81 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Gm7860-201ENSMUST00000121190 879 ntBASIC20.01■□□□□ 0.79
Rfx8D3YU81 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.01■□□□□ 0.79
Rfx8D3YU81 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rfx8D3YU81 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rfx8D3YU81 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rfx8D3YU81 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Gm42778-201ENSMUST00000199644 553 ntBASIC20■□□□□ 0.79
Rfx8D3YU81 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20■□□□□ 0.79
Rfx8D3YU81 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rfx8D3YU81 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Rfx8D3YU81 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Rfx8D3YU81 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rfx8D3YU81 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms