Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm28033-201ENSMUST00000184224 96 ntBASIC14.48□□□□□ -0.09
Col6a5A6H584 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.48□□□□□ -0.09
Col6a5A6H584 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a5A6H584 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a5A6H584 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a5A6H584 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a5A6H584 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col6a5A6H584 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Timm23-208ENSMUST00000226683 750 ntBASIC14.47□□□□□ -0.09
Col6a5A6H584 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col6a5A6H584 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.47□□□□□ -0.09
Col6a5A6H584 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col6a5A6H584 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col6a5A6H584 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.46□□□□□ -0.09
Col6a5A6H584 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col6a5A6H584 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col6a5A6H584 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a5A6H584 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a5A6H584 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Col6a5A6H584 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col6a5A6H584 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Gm7153-201ENSMUST00000117092 455 ntBASIC14.45□□□□□ -0.1
Col6a5A6H584 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a5A6H584 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a5A6H584 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.44□□□□□ -0.1
Col6a5A6H584 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.44□□□□□ -0.1
Col6a5A6H584 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a5A6H584 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.43□□□□□ -0.1
Col6a5A6H584 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col6a5A6H584 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a5A6H584 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a5A6H584 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
Col6a5A6H584 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Col6a5A6H584 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col6a5A6H584 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a5A6H584 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.42□□□□□ -0.1
Col6a5A6H584 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.42□□□□□ -0.1
Col6a5A6H584 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a5A6H584 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a5A6H584 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a5A6H584 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.41□□□□□ -0.1
Col6a5A6H584 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.41□□□□□ -0.1
Col6a5A6H584 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Col6a5A6H584 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a5A6H584 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Col6a5A6H584 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms