Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Chd6A3KFM7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.6■□□□□ 0.09
Chd6A3KFM7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Chd6A3KFM7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Chd6A3KFM7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Chd6A3KFM7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chd6A3KFM7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Chd6A3KFM7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Gm18032-201ENSMUST00000222541 538 ntBASIC15.58■□□□□ 0.08
Chd6A3KFM7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.58■□□□□ 0.08
Chd6A3KFM7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.58■□□□□ 0.08
Chd6A3KFM7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.58■□□□□ 0.08
Chd6A3KFM7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Chd6A3KFM7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.57■□□□□ 0.08
Chd6A3KFM7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.57■□□□□ 0.08
Chd6A3KFM7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chd6A3KFM7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd6A3KFM7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd6A3KFM7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.55■□□□□ 0.08
Chd6A3KFM7 Gm37935-201ENSMUST00000192012 982 ntBASIC15.55■□□□□ 0.08
Chd6A3KFM7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.55■□□□□ 0.08
Chd6A3KFM7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Gm43438-201ENSMUST00000198133 379 ntBASIC15.55■□□□□ 0.08
Chd6A3KFM7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd6A3KFM7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd6A3KFM7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Chd6A3KFM7 Gm44549-201ENSMUST00000208351 577 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms