Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12-1A0N8R1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Spcs1-204ENSMUST00000226782 949 ntBASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12-1A0N8R1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12-1A0N8R1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trav12-1A0N8R1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12-1A0N8R1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12-1A0N8R1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav12-1A0N8R1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms