Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smim17A0A504 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim17A0A504 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.23■□□□□ 0.35
Smim17A0A504 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smim17A0A504 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim17A0A504 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim17A0A504 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smim17A0A504 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smim17A0A504 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim17A0A504 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim17A0A504 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim17A0A504 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim17A0A504 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smim17A0A504 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smim17A0A504 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smim17A0A504 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Smim17A0A504 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smim17A0A504 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Smim17A0A504 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.21■□□□□ 0.35
Smim17A0A504 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.21■□□□□ 0.35
Smim17A0A504 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim17A0A504 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim17A0A504 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim17A0A504 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Smim17A0A504 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smim17A0A504 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Smim17A0A504 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim17A0A504 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.2■□□□□ 0.34
Smim17A0A504 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.2■□□□□ 0.34
Smim17A0A504 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
Smim17A0A504 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smim17A0A504 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.19■□□□□ 0.34
Smim17A0A504 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smim17A0A504 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Smim17A0A504 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smim17A0A504 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.18■□□□□ 0.34
Smim17A0A504 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim17A0A504 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.17■□□□□ 0.34
Smim17A0A504 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smim17A0A504 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim17A0A504 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Smim17A0A504 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.16■□□□□ 0.34
Smim17A0A504 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Smim17A0A504 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smim17A0A504 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim17A0A504 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smim17A0A504 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.15■□□□□ 0.34
Smim17A0A504 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim17A0A504 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms