Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc194A0A140LIT1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc194A0A140LIT1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc194A0A140LIT1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc194A0A140LIT1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc194A0A140LIT1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.81■□□□□ 0.6
Ccdc194A0A140LIT1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Gm12251-201ENSMUST00000117893 792 ntBASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc194A0A140LIT1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms