Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.04□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav13d-4A0A0G2JFX3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav13d-4A0A0G2JFX3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms