Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbv26A0A0B4J1P5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Gm8495-201ENSMUST00000188740 694 ntBASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbv26A0A0B4J1P5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv26A0A0B4J1P5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trbv26A0A0B4J1P5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbv26A0A0B4J1P5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm42642-201ENSMUST00000200683 355 ntBASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv26A0A0B4J1P5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm18671-201ENSMUST00000214826 683 ntBASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv26A0A0B4J1P5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Reep4-203ENSMUST00000226563 1444 ntBASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv26A0A0B4J1P5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv26A0A0B4J1P5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms