Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9-4A0A0B4J1K2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9-4A0A0B4J1K2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm7860-201ENSMUST00000121190 879 ntBASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.21□□□□□ -0.13
Trav9-4A0A0B4J1K2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9-4A0A0B4J1K2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9-4A0A0B4J1K2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm38205-201ENSMUST00000192243 258 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm10493-201ENSMUST00000097270 612 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Reep4-203ENSMUST00000226563 1444 ntBASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9-4A0A0B4J1K2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm42778-201ENSMUST00000199644 553 ntBASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm5874-201ENSMUST00000096101 508 ntBASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9-4A0A0B4J1K2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav9-4A0A0B4J1K2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms