Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Mir7075-201ENSMUST00000184187 82 ntBASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv19A0A0B4J1H4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv19A0A0B4J1H4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv19A0A0B4J1H4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv19A0A0B4J1H4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv19A0A0B4J1H4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv19A0A0B4J1H4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv19A0A0B4J1H4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm11421-201ENSMUST00000122124 294 ntBASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Smad6-203ENSMUST00000179458 273 ntBASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv19A0A0B4J1H4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv19A0A0B4J1H4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv19A0A0B4J1H4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv19A0A0B4J1H4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv19A0A0B4J1H4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Trbv19A0A0B4J1H4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms