Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
BC053393A0A0B4J1F6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BC053393A0A0B4J1F6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BC053393A0A0B4J1F6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BC053393A0A0B4J1F6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BC053393A0A0B4J1F6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
BC053393A0A0B4J1F6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
BC053393A0A0B4J1F6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms