Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sirpb1aA0A0A6YYP6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Serp2-204ENSMUST00000228055 705 ntBASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Gm22238-201ENSMUST00000175222 88 ntBASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sirpb1aA0A0A6YYP6 Grk6-206ENSMUST00000224995 2971 ntBASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.89■□□□□ 0.45
Sirpb1aA0A0A6YYP6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms