Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv1-47A0A0A6YY41 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm12251-201ENSMUST00000117893 792 ntBASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Serp2-204ENSMUST00000228055 705 ntBASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ighv1-47A0A0A6YY41 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm8493-201ENSMUST00000196881 489 ntBASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ighv1-47A0A0A6YY41 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.61■□□□□ 0.09
Ighv1-47A0A0A6YY41 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Grk6-206ENSMUST00000224995 2971 ntBASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-47A0A0A6YY41 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-47A0A0A6YY41 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms