Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm20049-201ENSMUST00000219950 730 ntBASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ighv1-42A0A0A6YY38 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-42A0A0A6YY38 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Rab3c-203ENSMUST00000224180 967 ntBASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-42A0A0A6YY38 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-42A0A0A6YY38 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-42A0A0A6YY38 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm8520-201ENSMUST00000186517 868 ntBASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-42A0A0A6YY38 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-42A0A0A6YY38 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-42A0A0A6YY38 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Gm22240-201ENSMUST00000175225 82 ntBASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ighv1-42A0A0A6YY38 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.52■□□□□ 0.39
Ighv1-42A0A0A6YY38 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ighv1-42A0A0A6YY38 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms