Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv21A0A0A6YX06 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Gm19891-201ENSMUST00000189771 303 ntBASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv21A0A0A6YX06 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Trbv21A0A0A6YX06 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv21A0A0A6YX06 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trbv21A0A0A6YX06 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv21A0A0A6YX06 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv21A0A0A6YX06 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms