Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6-4A0A075B6B4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-4A0A075B6B4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-4A0A075B6B4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-4A0A075B6B4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav6-4A0A075B6B4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Gm10493-201ENSMUST00000097270 612 ntBASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-4A0A075B6B4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gm7860-201ENSMUST00000121190 879 ntBASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gm42778-201ENSMUST00000199644 553 ntBASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6-4A0A075B6B4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-4A0A075B6B4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms