Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm5921-201ENSMUST00000075898 882 ntBASIC14.66□□□□□ -0.06
Trav16A0A075B653 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav16A0A075B653 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav16A0A075B653 AA386476-201ENSMUST00000098781 1665 ntBASIC14.65□□□□□ -0.06
Trav16A0A075B653 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.64□□□□□ -0.07
Trav16A0A075B653 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav16A0A075B653 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav16A0A075B653 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.63□□□□□ -0.07
Trav16A0A075B653 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav16A0A075B653 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Etf1-202ENSMUST00000180351 108 ntBASIC14.62□□□□□ -0.07
Trav16A0A075B653 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.62□□□□□ -0.07
Trav16A0A075B653 Gm9870-201ENSMUST00000063874 645 ntBASIC14.62□□□□□ -0.07
Trav16A0A075B653 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav16A0A075B653 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms