Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9n-4A0A075B631 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9n-4A0A075B631 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 AC126028.2-201ENSMUST00000228100 1833 ntBASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9n-4A0A075B631 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav9n-4A0A075B631 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav9n-4A0A075B631 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Serp2-204ENSMUST00000228055 705 ntBASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav9n-4A0A075B631 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms