Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.27■□□□□ 0.68
Speer3W4VSP1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Speer3W4VSP1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Speer3W4VSP1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Speer3W4VSP1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Speer3W4VSP1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
Speer3W4VSP1 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.25■□□□□ 0.67
Speer3W4VSP1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Gm37444-201ENSMUST00000193605 439 ntBASIC19.24■□□□□ 0.67
Speer3W4VSP1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Speer3W4VSP1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Speer3W4VSP1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Speer3W4VSP1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Speer3W4VSP1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Speer3W4VSP1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Speer3W4VSP1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Speer3W4VSP1 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.22■□□□□ 0.67
Speer3W4VSP1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Speer3W4VSP1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Speer3W4VSP1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Speer3W4VSP1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.2■□□□□ 0.66
Speer3W4VSP1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Speer3W4VSP1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms