Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.55□□□□□ -0.08
PdfS4R2K0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PdfS4R2K0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PdfS4R2K0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.54□□□□□ -0.08
PdfS4R2K0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PdfS4R2K0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PdfS4R2K0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PdfS4R2K0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PdfS4R2K0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
PdfS4R2K0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PdfS4R2K0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.53□□□□□ -0.08
PdfS4R2K0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PdfS4R2K0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PdfS4R2K0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.52□□□□□ -0.08
PdfS4R2K0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PdfS4R2K0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.52□□□□□ -0.09
PdfS4R2K0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.52□□□□□ -0.09
PdfS4R2K0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.52□□□□□ -0.09
PdfS4R2K0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
PdfS4R2K0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PdfS4R2K0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.51□□□□□ -0.09
PdfS4R2K0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
PdfS4R2K0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PdfS4R2K0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PdfS4R2K0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PdfS4R2K0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms