Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk1bQ9Z2C6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk1bQ9Z2C6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Upk1bQ9Z2C6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Upk1bQ9Z2C6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Upk1bQ9Z2C6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Upk1bQ9Z2C6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.64■□□□□ 0.41
Upk1bQ9Z2C6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upk1bQ9Z2C6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk1bQ9Z2C6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk1bQ9Z2C6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk1bQ9Z2C6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms