Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Htra1Q9R118 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Htra1Q9R118 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Htra1Q9R118 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Htra1Q9R118 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.54■□□□□ 0.4
Htra1Q9R118 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Htra1Q9R118 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Htra1Q9R118 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.54■□□□□ 0.4
Htra1Q9R118 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.54■□□□□ 0.4
Htra1Q9R118 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.54■□□□□ 0.4
Htra1Q9R118 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.54■□□□□ 0.4
Htra1Q9R118 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.54■□□□□ 0.4
Htra1Q9R118 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.54■□□□□ 0.4
Htra1Q9R118 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Htra1Q9R118 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Htra1Q9R118 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Htra1Q9R118 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.53■□□□□ 0.4
Htra1Q9R118 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.53■□□□□ 0.4
Htra1Q9R118 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Htra1Q9R118 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Htra1Q9R118 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 Gm12922-201ENSMUST00000120626 809 ntBASIC17.52■□□□□ 0.4
Htra1Q9R118 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Htra1Q9R118 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
Htra1Q9R118 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Htra1Q9R118 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.52■□□□□ 0.4
Htra1Q9R118 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Htra1Q9R118 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.52■□□□□ 0.39
Htra1Q9R118 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Htra1Q9R118 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Htra1Q9R118 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Htra1Q9R118 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Htra1Q9R118 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Htra1Q9R118 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Htra1Q9R118 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.51■□□□□ 0.39
Htra1Q9R118 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.51■□□□□ 0.39
Htra1Q9R118 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Htra1Q9R118 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Mir6236-201ENSMUST00000184437 123 ntBASIC17.5■□□□□ 0.39
Htra1Q9R118 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Htra1Q9R118 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Htra1Q9R118 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms