Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gpc6Q9R087 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gpc6Q9R087 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.68■□□□□ 0.42
Gpc6Q9R087 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gpc6Q9R087 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Gpc6Q9R087 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.67■□□□□ 0.42
Gpc6Q9R087 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.67■□□□□ 0.42
Gpc6Q9R087 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gpc6Q9R087 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gpc6Q9R087 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.66■□□□□ 0.42
Gpc6Q9R087 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.66■□□□□ 0.42
Gpc6Q9R087 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gpc6Q9R087 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.65■□□□□ 0.42
Gpc6Q9R087 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.65■□□□□ 0.42
Gpc6Q9R087 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Gm45102-201ENSMUST00000207427 857 ntBASIC17.65■□□□□ 0.42
Gpc6Q9R087 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gpc6Q9R087 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Gpc6Q9R087 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Gpc6Q9R087 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.63■□□□□ 0.41
Gpc6Q9R087 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.63■□□□□ 0.41
Gpc6Q9R087 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Rps24-207ENSMUST00000224568 714 ntBASIC17.63■□□□□ 0.41
Gpc6Q9R087 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gpc6Q9R087 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gpc6Q9R087 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms