Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Gm13234-201ENSMUST00000120010 747 ntBASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Shroom3Q9QXN0 Reep4-203ENSMUST00000226563 1444 ntBASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Shroom3Q9QXN0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Shroom3Q9QXN0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Shroom3Q9QXN0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Shroom3Q9QXN0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Shroom3Q9QXN0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Shroom3Q9QXN0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Gm7860-201ENSMUST00000121190 879 ntBASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom3Q9QXN0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms