Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.31■□□□□ 0.68
Msh5Q9QUM7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.3■□□□□ 0.68
Msh5Q9QUM7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Msh5Q9QUM7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Gm25007-201ENSMUST00000083808 133 ntBASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Msh5Q9QUM7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.27■□□□□ 0.68
Msh5Q9QUM7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Msh5Q9QUM7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Serp2-204ENSMUST00000228055 705 ntBASIC19.26■□□□□ 0.67
Msh5Q9QUM7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msh5Q9QUM7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msh5Q9QUM7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msh5Q9QUM7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms