Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.69■□□□□ 0.58
Tlr4Q9QUK6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tlr4Q9QUK6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tlr4Q9QUK6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tlr4Q9QUK6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tlr4Q9QUK6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Tlr4Q9QUK6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tlr4Q9QUK6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tlr4Q9QUK6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tlr4Q9QUK6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tlr4Q9QUK6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.61■□□□□ 0.57
Tlr4Q9QUK6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tlr4Q9QUK6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms