Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx5Q9JL61 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx5Q9JL61 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Gm27405-201ENSMUST00000184201 112 ntBASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx5Q9JL61 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rfx5Q9JL61 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Gm7291-201ENSMUST00000199147 382 ntBASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Gm7514-201ENSMUST00000209475 934 ntBASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx5Q9JL61 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.16■□□□□ 0.82
Rfx5Q9JL61 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx5Q9JL61 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Rfx5Q9JL61 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx5Q9JL61 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx5Q9JL61 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.13■□□□□ 0.81
Rfx5Q9JL61 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfx5Q9JL61 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.12■□□□□ 0.81
Rfx5Q9JL61 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfx5Q9JL61 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfx5Q9JL61 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms