Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpd3Q9JJY3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Smpd3Q9JJY3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpd3Q9JJY3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smpd3Q9JJY3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.37■□□□□ 0.53
Smpd3Q9JJY3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Smpd3Q9JJY3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smpd3Q9JJY3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smpd3Q9JJY3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.33■□□□□ 0.53
Smpd3Q9JJY3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Smpd3Q9JJY3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Smpd3Q9JJY3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smpd3Q9JJY3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smpd3Q9JJY3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smpd3Q9JJY3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Gm27454-201ENSMUST00000185090 204 ntBASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.31■□□□□ 0.52
Smpd3Q9JJY3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smpd3Q9JJY3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms