Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4bQ9ES00 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Gm13238-201ENSMUST00000117655 780 ntBASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube4bQ9ES00 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube4bQ9ES00 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube4bQ9ES00 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ube4bQ9ES00 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4bQ9ES00 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4bQ9ES00 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Fst-202ENSMUST00000223640 2612 ntBASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Ube4bQ9ES00 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4bQ9ES00 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4bQ9ES00 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms