Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps35Q9EQH3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19■□□□□ 0.63
Vps35Q9EQH3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19■□□□□ 0.63
Vps35Q9EQH3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Vps35Q9EQH3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Vps35Q9EQH3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19■□□□□ 0.63
Vps35Q9EQH3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps35Q9EQH3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps35Q9EQH3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19■□□□□ 0.63
Vps35Q9EQH3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps35Q9EQH3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Vps35Q9EQH3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps35Q9EQH3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Gm8495-201ENSMUST00000188740 694 ntBASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps35Q9EQH3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.96■□□□□ 0.63
Vps35Q9EQH3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.96■□□□□ 0.63
Vps35Q9EQH3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Gm5874-201ENSMUST00000096101 508 ntBASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps35Q9EQH3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps35Q9EQH3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Vps35Q9EQH3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps35Q9EQH3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.93■□□□□ 0.62
Vps35Q9EQH3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps35Q9EQH3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.92■□□□□ 0.62
Vps35Q9EQH3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Vps35Q9EQH3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms