Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.44■□□□□ 0.22
Ssmem1Q9D9Y8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.44■□□□□ 0.22
Ssmem1Q9D9Y8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ssmem1Q9D9Y8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssmem1Q9D9Y8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ssmem1Q9D9Y8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ssmem1Q9D9Y8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Gm7291-201ENSMUST00000199147 382 ntBASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssmem1Q9D9Y8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ssmem1Q9D9Y8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Golph3-202ENSMUST00000226517 2359 ntBASIC16.4■□□□□ 0.22
Ssmem1Q9D9Y8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssmem1Q9D9Y8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssmem1Q9D9Y8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssmem1Q9D9Y8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Gm7514-201ENSMUST00000209475 934 ntBASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ssmem1Q9D9Y8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.37■□□□□ 0.21
Ssmem1Q9D9Y8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms