Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tmem54Q9D7S1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tmem54Q9D7S1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tmem54Q9D7S1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tmem54Q9D7S1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Gm13146-201ENSMUST00000118508 780 ntBASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Gm18671-201ENSMUST00000214826 683 ntBASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tmem54Q9D7S1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tmem54Q9D7S1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Tmem54Q9D7S1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tmem54Q9D7S1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Gm26571-201ENSMUST00000181399 666 ntBASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tmem54Q9D7S1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms