Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tube1Q9D6T1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tube1Q9D6T1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Tube1Q9D6T1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tube1Q9D6T1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Reep4-203ENSMUST00000226563 1444 ntBASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tube1Q9D6T1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tube1Q9D6T1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tube1Q9D6T1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Gm13234-201ENSMUST00000120010 747 ntBASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Tube1Q9D6T1 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tube1Q9D6T1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tube1Q9D6T1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tube1Q9D6T1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tube1Q9D6T1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tube1Q9D6T1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms